Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.68■□□□□ 0.1
SSR1P43307 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SSR1P43307 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 ACKR1-201ENST00000368121 1240 ntBASIC15.67■□□□□ 0.1
SSR1P43307 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.67■□□□□ 0.1
SSR1P43307 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.67■□□□□ 0.1
SSR1P43307 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.67■□□□□ 0.1
SSR1P43307 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.67■□□□□ 0.1
SSR1P43307 AC009486.1-201ENST00000569860 813 ntBASIC15.67■□□□□ 0.1
SSR1P43307 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.67■□□□□ 0.1
SSR1P43307 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 AC004466.1-201ENST00000599515 1080 ntBASIC15.67■□□□□ 0.1
SSR1P43307 AL355385.1-201ENST00000606123 409 ntBASIC15.67■□□□□ 0.1
SSR1P43307 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 AGGF1P1-201ENST00000509500 2073 ntBASIC15.67■□□□□ 0.1
SSR1P43307 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.67■□□□□ 0.1
SSR1P43307 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SSR1P43307 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSR1P43307 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SSR1P43307 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SSR1P43307 DGCR5-201ENST00000399539 862 ntBASIC15.66■□□□□ 0.1
SSR1P43307 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.66■□□□□ 0.1
SSR1P43307 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.66■□□□□ 0.1
SSR1P43307 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.66■□□□□ 0.1
SSR1P43307 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.66■□□□□ 0.1
SSR1P43307 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 AL603764.1-201ENST00000636452 321 ntBASIC15.66■□□□□ 0.1
SSR1P43307 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.66■□□□□ 0.1
SSR1P43307 AC131902.2-201ENST00000566892 2172 ntBASIC15.66■□□□□ 0.1
SSR1P43307 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.66■□□□□ 0.1
SSR1P43307 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSR1P43307 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SSR1P43307 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSR1P43307 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms