Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 USP32P1-208ENST00000506594 1164 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A1P43005 BCRP6-201ENST00000510112 632 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 BCRP7-201ENST00000511549 544 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC1A1P43005 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A1P43005 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A1P43005 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 MIR4683-201ENST00000579659 81 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A1P43005 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A1P43005 AL355385.1-201ENST00000606123 409 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 AC130686.1-201ENST00000622936 2466 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A1P43005 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A1P43005 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 AL022313.4-201ENST00000562756 2046 ntBASIC15.29■□□□□ 0.04
SLC1A1P43005 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 CNN2P8-201ENST00000421872 913 ntBASIC15.29■□□□□ 0.04
SLC1A1P43005 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 COX5BP1-201ENST00000507622 393 ntBASIC15.29■□□□□ 0.04
SLC1A1P43005 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC1A1P43005 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A1P43005 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
SLC1A1P43005 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A1P43005 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A1P43005 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A1P43005 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 AL354989.2-201ENST00000435838 1540 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 AL157996.1-201ENST00000624684 2299 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A1P43005 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A1P43005 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC1A1P43005 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A1P43005 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A1P43005 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 USP17L6P-201ENST00000382470 1197 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 AC010141.1-201ENST00000411585 623 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.28■□□□□ 0.04
SLC1A1P43005 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A1P43005 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC1A1P43005 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A1P43005 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms