Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.52□□□□□ -0.41
CDKN1AP38936 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.52□□□□□ -0.41
CDKN1AP38936 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.52□□□□□ -0.41
CDKN1AP38936 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 AC242376.1-201ENST00000559033 726 ntBASIC12.52□□□□□ -0.41
CDKN1AP38936 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.52□□□□□ -0.41
CDKN1AP38936 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.52□□□□□ -0.41
CDKN1AP38936 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CDKN1AP38936 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 TBC1D3J-201ENST00000620719 1426 ntBASIC12.52□□□□□ -0.41
CDKN1AP38936 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.52□□□□□ -0.41
CDKN1AP38936 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 KRT8P21-201ENST00000430398 1491 ntBASIC12.52□□□□□ -0.41
CDKN1AP38936 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.52□□□□□ -0.41
CDKN1AP38936 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CDKN1AP38936 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDKN1AP38936 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.51□□□□□ -0.41
CDKN1AP38936 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CDKN1AP38936 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC078875.1-201ENST00000431907 724 ntBASIC12.51□□□□□ -0.41
CDKN1AP38936 LDHBP1-201ENST00000455730 1119 ntBASIC12.51□□□□□ -0.41
CDKN1AP38936 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.51□□□□□ -0.41
CDKN1AP38936 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.51□□□□□ -0.41
CDKN1AP38936 AC006453.1-201ENST00000636037 1257 ntBASIC12.51□□□□□ -0.41
CDKN1AP38936 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CDKN1AP38936 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.51□□□□□ -0.41
CDKN1AP38936 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDKN1AP38936 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms