Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SLC6A4P31645 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AC239868.1-201ENST00000369385 493 ntBASIC14.92□□□□□ -0.02
SLC6A4P31645 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.92□□□□□ -0.02
SLC6A4P31645 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 IMP3P2-201ENST00000489760 475 ntBASIC14.92□□□□□ -0.02
SLC6A4P31645 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC6A4P31645 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AC090505.1-201ENST00000430515 1834 ntBASIC14.92□□□□□ -0.02
SLC6A4P31645 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 AC064801.2-201ENST00000625052 1303 ntBASIC14.92□□□□□ -0.02
SLC6A4P31645 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 AP002353.1-201ENST00000528257 1599 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 AC012617.1-204ENST00000586340 2305 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 TSPY25P-201ENST00000429463 745 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 AL133466.1-201ENST00000447582 150 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 AC245884.6-201ENST00000515672 1067 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC6A4P31645 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 AC105129.2-201ENST00000559536 390 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC6A4P31645 AC084346.2-201ENST00000607097 949 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC6A4P31645 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 AL136379.1-201ENST00000623471 2642 ntBASIC14.91□□□□□ -0.02
SLC6A4P31645 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC6A4P31645 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC6A4P31645 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms