Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 AL035414.1-201ENST00000451327 857 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.49□□□□□ -0.09
GABRB3P28472 CROCCP4-201ENST00000457096 498 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 AP000812.2-201ENST00000538934 718 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.49□□□□□ -0.09
GABRB3P28472 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.49□□□□□ -0.09
GABRB3P28472 PPY2P-201ENST00000582808 702 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 ZACNP1-201ENST00000612259 710 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.49□□□□□ -0.09
GABRB3P28472 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.49□□□□□ -0.09
GABRB3P28472 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 SHC1P1-201ENST00000425230 1745 ntBASIC14.49□□□□□ -0.09
GABRB3P28472 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GABRB3P28472 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.49□□□□□ -0.09
GABRB3P28472 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.49□□□□□ -0.09
GABRB3P28472 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GABRB3P28472 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
GABRB3P28472 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.48□□□□□ -0.09
GABRB3P28472 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.48□□□□□ -0.09
GABRB3P28472 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.48□□□□□ -0.09
GABRB3P28472 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.48□□□□□ -0.09
GABRB3P28472 MIR4783-201ENST00000580343 82 ntBASIC14.48□□□□□ -0.09
GABRB3P28472 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 MIR3197-201ENST00000582241 73 ntBASIC14.48□□□□□ -0.09
GABRB3P28472 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.48□□□□□ -0.09
GABRB3P28472 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 AL136301.1-201ENST00000615830 422 ntBASIC14.48□□□□□ -0.09
GABRB3P28472 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
GABRB3P28472 E2F3P2-201ENST00000447755 1422 ntBASIC14.48□□□□□ -0.09
GABRB3P28472 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GABRB3P28472 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GABRB3P28472 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GABRB3P28472 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GABRB3P28472 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GABRB3P28472 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GABRB3P28472 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
GABRB3P28472 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.47□□□□□ -0.09
GABRB3P28472 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GABRB3P28472 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GABRB3P28472 AHCYP2-201ENST00000430630 1300 ntBASIC14.47□□□□□ -0.09
GABRB3P28472 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms