Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.79□□□□□ -0.2
PEX2P28328 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PEX2P28328 AL021155.1-201ENST00000438808 2637 ntBASIC13.78□□□□□ -0.2
PEX2P28328 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PEX2P28328 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PEX2P28328 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.78□□□□□ -0.2
PEX2P28328 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 SPDYE11-202ENST00000450699 704 ntBASIC13.78□□□□□ -0.2
PEX2P28328 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PEX2P28328 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.78□□□□□ -0.2
PEX2P28328 KRT8P48-201ENST00000515599 1220 ntBASIC13.78□□□□□ -0.2
PEX2P28328 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
PEX2P28328 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.78□□□□□ -0.2
PEX2P28328 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.78□□□□□ -0.2
PEX2P28328 SPDYE9P-201ENST00000570642 692 ntBASIC13.78□□□□□ -0.2
PEX2P28328 AC140113.2-201ENST00000604370 208 ntBASIC13.78□□□□□ -0.2
PEX2P28328 SPDYE10P-202ENST00000612005 668 ntBASIC13.78□□□□□ -0.2
PEX2P28328 SPDYE8P-202ENST00000612377 668 ntBASIC13.78□□□□□ -0.2
PEX2P28328 AC091812.2-201ENST00000619081 385 ntBASIC13.78□□□□□ -0.2
PEX2P28328 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 AL359845.1-201ENST00000458202 1648 ntBASIC13.78□□□□□ -0.2
PEX2P28328 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PEX2P28328 AC026271.4-201ENST00000578214 1833 ntBASIC13.78□□□□□ -0.2
PEX2P28328 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.78□□□□□ -0.2
PEX2P28328 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PEX2P28328 AL731571.1-201ENST00000617058 5428 ntBASIC13.77□□□□□ -0.2
PEX2P28328 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PEX2P28328 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PEX2P28328 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PEX2P28328 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.77□□□□□ -0.2
PEX2P28328 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PEX2P28328 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PEX2P28328 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.77□□□□□ -0.21
PEX2P28328 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PEX2P28328 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.77□□□□□ -0.21
PEX2P28328 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.77□□□□□ -0.21
PEX2P28328 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.77□□□□□ -0.21
PEX2P28328 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.77□□□□□ -0.21
PEX2P28328 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PEX2P28328 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.77□□□□□ -0.21
PEX2P28328 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.77□□□□□ -0.21
PEX2P28328 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.77□□□□□ -0.21
PEX2P28328 SLC25A1P1-201ENST00000528351 927 ntBASIC13.77□□□□□ -0.21
PEX2P28328 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.77□□□□□ -0.21
PEX2P28328 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PEX2P28328 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 AC000095.1-201ENST00000603208 874 ntBASIC13.77□□□□□ -0.21
PEX2P28328 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PEX2P28328 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 AC093525.8-201ENST00000624099 1342 ntBASIC13.77□□□□□ -0.21
PEX2P28328 MIR193BHG-211ENST00000641433 5365 ntBASIC13.77□□□□□ -0.21
PEX2P28328 AC084121.4-201ENST00000641598 221 ntBASIC13.77□□□□□ -0.21
PEX2P28328 AF228730.8-201ENST00000642140 221 ntBASIC13.77□□□□□ -0.21
PEX2P28328 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PEX2P28328 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PEX2P28328 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms