Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AC152010.1-201ENST00000415779 2006 ntBASIC14.51□□□□□ -0.09
VARSP26640 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 PPT1-213ENST00000641319 2388 ntBASIC14.5□□□□□ -0.09
VARSP26640 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VARSP26640 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.5□□□□□ -0.09
VARSP26640 AP001889.1-201ENST00000525414 633 ntBASIC14.5□□□□□ -0.09
VARSP26640 SNX29P1-201ENST00000548357 1007 ntBASIC14.5□□□□□ -0.09
VARSP26640 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 TMEM14EP-202ENST00000639378 1296 ntBASIC14.5□□□□□ -0.09
VARSP26640 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VARSP26640 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VARSP26640 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.5□□□□□ -0.09
VARSP26640 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VARSP26640 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VARSP26640 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
VARSP26640 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms