Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.74■□□□□ 0.27
BMP3P12645 RPS9P1-201ENST00000419943 583 ntBASIC16.74■□□□□ 0.27
BMP3P12645 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.74■□□□□ 0.27
BMP3P12645 DUTP3-201ENST00000450025 415 ntBASIC16.74■□□□□ 0.27
BMP3P12645 TPT1P11-201ENST00000458482 498 ntBASIC16.74■□□□□ 0.27
BMP3P12645 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.74■□□□□ 0.27
BMP3P12645 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.74■□□□□ 0.27
BMP3P12645 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BMP3P12645 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
BMP3P12645 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BMP3P12645 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BMP3P12645 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.74■□□□□ 0.27
BMP3P12645 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 AC064801.2-201ENST00000625052 1303 ntBASIC16.73■□□□□ 0.27
BMP3P12645 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 TNRC18P2-201ENST00000417666 2714 ntBASIC16.73■□□□□ 0.27
BMP3P12645 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 KRT17P5-201ENST00000332088 839 ntBASIC16.73■□□□□ 0.27
BMP3P12645 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 MIR557-201ENST00000385239 98 ntBASIC16.73■□□□□ 0.27
BMP3P12645 AL592076.1-201ENST00000424448 303 ntBASIC16.73■□□□□ 0.27
BMP3P12645 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.73■□□□□ 0.27
BMP3P12645 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.73■□□□□ 0.27
BMP3P12645 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.73■□□□□ 0.27
BMP3P12645 AC114947.1-202ENST00000514136 344 ntBASIC16.73■□□□□ 0.27
BMP3P12645 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BMP3P12645 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.73■□□□□ 0.27
BMP3P12645 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 SIGLEC18P-201ENST00000602271 909 ntBASIC16.73■□□□□ 0.27
BMP3P12645 AC103810.10-201ENST00000606504 343 ntBASIC16.73■□□□□ 0.27
BMP3P12645 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
BMP3P12645 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BMP3P12645 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BMP3P12645 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.72■□□□□ 0.27
BMP3P12645 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 FXNP2-201ENST00000411625 547 ntBASIC16.72■□□□□ 0.27
BMP3P12645 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 AC069218.1-201ENST00000435269 762 ntBASIC16.72■□□□□ 0.27
BMP3P12645 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.72■□□□□ 0.27
BMP3P12645 RPS2P36-201ENST00000456516 831 ntBASIC16.72■□□□□ 0.27
BMP3P12645 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 MIR4722-201ENST00000578292 60 ntBASIC16.72■□□□□ 0.27
BMP3P12645 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.72■□□□□ 0.27
BMP3P12645 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.72■□□□□ 0.27
BMP3P12645 AC104506.1-201ENST00000609247 429 ntBASIC16.72■□□□□ 0.27
BMP3P12645 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
BMP3P12645 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BMP3P12645 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BMP3P12645 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 AC113367.3-201ENST00000508316 1912 ntBASIC16.72■□□□□ 0.27
BMP3P12645 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
BMP3P12645 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
BMP3P12645 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BMP3P12645 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BMP3P12645 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BMP3P12645 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.71■□□□□ 0.27
BMP3P12645 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms