Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLUP10909 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLUP10909 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLUP10909 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLUP10909 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLUP10909 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLUP10909 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLUP10909 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLUP10909 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.26□□□□□ -0.29
CLUP10909 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLUP10909 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 AC011840.2-201ENST00000563063 1520 ntBASIC13.25□□□□□ -0.29
CLUP10909 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.25□□□□□ -0.29
CLUP10909 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.25□□□□□ -0.29
CLUP10909 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 AC131206.1-201ENST00000538078 1211 ntBASIC13.25□□□□□ -0.29
CLUP10909 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.25□□□□□ -0.29
CLUP10909 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CLUP10909 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.25□□□□□ -0.29
CLUP10909 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 AC020910.5-201ENST00000623668 1865 ntBASIC13.25□□□□□ -0.29
CLUP10909 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CLUP10909 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLUP10909 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.24□□□□□ -0.29
CLUP10909 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLUP10909 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLUP10909 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.24□□□□□ -0.29
CLUP10909 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
CLUP10909 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CLUP10909 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLUP10909 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.24□□□□□ -0.29
CLUP10909 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 STRCP1-201ENST00000509801 5328 ntBASIC13.24□□□□□ -0.29
CLUP10909 AL138725.1-201ENST00000407347 1314 ntBASIC13.24□□□□□ -0.29
CLUP10909 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.24□□□□□ -0.29
CLUP10909 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 RN7SKP230-201ENST00000365642 335 ntBASIC13.24□□□□□ -0.29
CLUP10909 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.24□□□□□ -0.29
CLUP10909 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLUP10909 ACTBP8-201ENST00000403258 1108 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms