Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.28■□□□□ 0.04
RB1P06400 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RB1P06400 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RB1P06400 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
RB1P06400 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.27■□□□□ 0.04
RB1P06400 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
RB1P06400 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RB1P06400 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RB1P06400 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RB1P06400 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 RNVU1-8-201ENST00000364272 125 ntBASIC15.27■□□□□ 0.04
RB1P06400 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.27■□□□□ 0.04
RB1P06400 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RB1P06400 AC244197.1-201ENST00000456494 951 ntBASIC15.27■□□□□ 0.04
RB1P06400 AC008026.2-201ENST00000495438 348 ntBASIC15.27■□□□□ 0.04
RB1P06400 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 AC145285.5-201ENST00000562217 361 ntBASIC15.27■□□□□ 0.04
RB1P06400 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.27■□□□□ 0.04
RB1P06400 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.27■□□□□ 0.04
RB1P06400 AC006548.2-201ENST00000605217 529 ntBASIC15.27■□□□□ 0.04
RB1P06400 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.27■□□□□ 0.04
RB1P06400 AC006483.2-201ENST00000609813 515 ntBASIC15.27■□□□□ 0.04
RB1P06400 AC018695.6-201ENST00000614011 534 ntBASIC15.27■□□□□ 0.04
RB1P06400 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RB1P06400 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.27■□□□□ 0.03
RB1P06400 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.27■□□□□ 0.03
RB1P06400 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.27■□□□□ 0.03
RB1P06400 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.27■□□□□ 0.03
RB1P06400 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RB1P06400 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RB1P06400 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 TSPY26P-202ENST00000565928 3884 ntBASIC15.26■□□□□ 0.03
RB1P06400 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RB1P06400 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.26■□□□□ 0.03
RB1P06400 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 MIR1301-201ENST00000408518 82 ntBASIC15.26■□□□□ 0.03
RB1P06400 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.26■□□□□ 0.03
RB1P06400 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 RN7SL564P-201ENST00000496309 250 ntBASIC15.26■□□□□ 0.03
RB1P06400 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.26■□□□□ 0.03
RB1P06400 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.26■□□□□ 0.03
RB1P06400 AC005586.2-201ENST00000563946 837 ntBASIC15.26■□□□□ 0.03
RB1P06400 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.26■□□□□ 0.03
RB1P06400 AC012073.1-201ENST00000606114 1108 ntBASIC15.26■□□□□ 0.03
RB1P06400 AC010976.2-201ENST00000609697 852 ntBASIC15.26■□□□□ 0.03
RB1P06400 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RB1P06400 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.26■□□□□ 0.03
RB1P06400 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.26■□□□□ 0.03
RB1P06400 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.26■□□□□ 0.03
RB1P06400 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 CICP23-201ENST00000605013 2741 ntBASIC15.26■□□□□ 0.03
RB1P06400 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RB1P06400 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RB1P06400 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.26■□□□□ 0.03
RB1P06400 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms