Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 AC092580.1-201ENST00000433998 658 ntBASIC17.44■□□□□ 0.38
CHGBP05060 IGHJ2P-201ENST00000454480 60 ntBASIC17.44■□□□□ 0.38
CHGBP05060 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 RN7SL574P-201ENST00000581512 297 ntBASIC17.44■□□□□ 0.38
CHGBP05060 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.44■□□□□ 0.38
CHGBP05060 AC104506.1-201ENST00000609247 429 ntBASIC17.44■□□□□ 0.38
CHGBP05060 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 AL805961.1-203ENST00000641078 1258 ntBASIC17.44■□□□□ 0.38
CHGBP05060 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.44■□□□□ 0.38
CHGBP05060 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.43■□□□□ 0.38
CHGBP05060 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.43■□□□□ 0.38
CHGBP05060 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHGBP05060 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHGBP05060 RN7SKP214-201ENST00000364208 315 ntBASIC17.43■□□□□ 0.38
CHGBP05060 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHGBP05060 AL596276.2-201ENST00000447525 331 ntBASIC17.43■□□□□ 0.38
CHGBP05060 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 AC005586.2-201ENST00000563946 837 ntBASIC17.43■□□□□ 0.38
CHGBP05060 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHGBP05060 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CHGBP05060 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
CHGBP05060 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHGBP05060 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHGBP05060 AC016397.2-201ENST00000624848 1985 ntBASIC17.42■□□□□ 0.38
CHGBP05060 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.42■□□□□ 0.38
CHGBP05060 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHGBP05060 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CHGBP05060 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 BCYRN1-201ENST00000418539 200 ntBASIC17.42■□□□□ 0.38
CHGBP05060 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 ISCA2P1-201ENST00000425548 448 ntBASIC17.42■□□□□ 0.38
CHGBP05060 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.42■□□□□ 0.38
CHGBP05060 AC073150.1-201ENST00000450406 1084 ntBASIC17.42■□□□□ 0.38
CHGBP05060 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.42■□□□□ 0.38
CHGBP05060 RN7SL11P-201ENST00000471305 293 ntBASIC17.42■□□□□ 0.38
CHGBP05060 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.42■□□□□ 0.38
CHGBP05060 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.42■□□□□ 0.38
CHGBP05060 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.42■□□□□ 0.38
CHGBP05060 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.42■□□□□ 0.38
CHGBP05060 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.42■□□□□ 0.38
CHGBP05060 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.42■□□□□ 0.38
CHGBP05060 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 AC097724.1-201ENST00000609581 426 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms