Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
APOA1P02647 HIST3H2BA-201ENST00000436555 524 ntBASIC13.1□□□□□ -0.31
APOA1P02647 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 AP000842.3-202ENST00000569238 1080 ntBASIC13.1□□□□□ -0.31
APOA1P02647 AL121912.1-201ENST00000603683 238 ntBASIC13.1□□□□□ -0.31
APOA1P02647 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.1□□□□□ -0.31
APOA1P02647 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOA1P02647 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
APOA1P02647 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 MKRN5P-201ENST00000445263 1467 ntBASIC13.1□□□□□ -0.31
APOA1P02647 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOA1P02647 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOA1P02647 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOA1P02647 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.09□□□□□ -0.31
APOA1P02647 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.09□□□□□ -0.31
APOA1P02647 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 AC079776.4-201ENST00000511039 504 ntBASIC13.09□□□□□ -0.31
APOA1P02647 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 RNA5SP415-201ENST00000517246 115 ntBASIC13.09□□□□□ -0.31
APOA1P02647 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.09□□□□□ -0.31
APOA1P02647 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 AC074044.1-201ENST00000609673 707 ntBASIC13.09□□□□□ -0.31
APOA1P02647 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.09□□□□□ -0.31
APOA1P02647 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOA1P02647 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOA1P02647 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOA1P02647 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.08□□□□□ -0.31
APOA1P02647 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
APOA1P02647 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
APOA1P02647 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 TFAMP1-201ENST00000412727 736 ntBASIC13.08□□□□□ -0.32
APOA1P02647 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.08□□□□□ -0.32
APOA1P02647 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms