Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD4P01730 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.02■□□□□ 0.16
CD4P01730 AL512306.1-201ENST00000432698 848 ntBASIC16.02■□□□□ 0.16
CD4P01730 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.02■□□□□ 0.16
CD4P01730 DPY19L2P5-201ENST00000456300 331 ntBASIC16.02■□□□□ 0.16
CD4P01730 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.02■□□□□ 0.16
CD4P01730 AC084752.1-201ENST00000509766 622 ntBASIC16.02■□□□□ 0.16
CD4P01730 RNA5SP417-201ENST00000516459 108 ntBASIC16.02■□□□□ 0.16
CD4P01730 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD4P01730 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD4P01730 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.02■□□□□ 0.16
CD4P01730 KRT8P1-201ENST00000557533 1207 ntBASIC16.02■□□□□ 0.16
CD4P01730 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.02■□□□□ 0.16
CD4P01730 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.02■□□□□ 0.16
CD4P01730 AC006158.1-201ENST00000610661 249 ntBASIC16.02■□□□□ 0.16
CD4P01730 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CD4P01730 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CD4P01730 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CD4P01730 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CD4P01730 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CD4P01730 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CD4P01730 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CD4P01730 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.02■□□□□ 0.15
CD4P01730 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD4P01730 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CD4P01730 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.01■□□□□ 0.15
CD4P01730 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD4P01730 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.01■□□□□ 0.15
CD4P01730 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.01■□□□□ 0.15
CD4P01730 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 AC138701.2-201ENST00000553634 226 ntBASIC16.01■□□□□ 0.15
CD4P01730 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.01■□□□□ 0.15
CD4P01730 AC124068.2-201ENST00000569473 1109 ntBASIC16.01■□□□□ 0.15
CD4P01730 AC007952.4-201ENST00000573866 637 ntBASIC16.01■□□□□ 0.15
CD4P01730 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 LINC00528-201ENST00000600723 2160 ntBASIC16.01■□□□□ 0.15
CD4P01730 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD4P01730 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.01■□□□□ 0.15
CD4P01730 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD4P01730 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.01■□□□□ 0.15
CD4P01730 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.01■□□□□ 0.15
CD4P01730 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD4P01730 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CD4P01730 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16■□□□□ 0.15
CD4P01730 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16■□□□□ 0.15
CD4P01730 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16■□□□□ 0.15
CD4P01730 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CD4P01730 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms