Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AL138828.2-201ENST00000615812 383 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
CDRT1O95170 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDRT1O95170 AP002761.4-201ENST00000565433 3361 ntBASIC13.11□□□□□ -0.31
CDRT1O95170 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.11□□□□□ -0.31
CDRT1O95170 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 MIR193BHG-211ENST00000641433 5365 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.1□□□□□ -0.31
CDRT1O95170 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.1□□□□□ -0.31
CDRT1O95170 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 AC254562.1-201ENST00000417586 456 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 HLA-K-203ENST00000430151 1046 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.1□□□□□ -0.31
CDRT1O95170 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 HLA-V-204ENST00000476601 1289 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 AC010336.2-201ENST00000564226 506 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 AC027612.4-201ENST00000605371 583 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.1□□□□□ -0.31
CDRT1O95170 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.1□□□□□ -0.31
CDRT1O95170 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CDRT1O95170 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CDRT1O95170 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 NCLP1-201ENST00000445357 1963 ntBASIC13.1□□□□□ -0.31
CDRT1O95170 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDRT1O95170 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
CDRT1O95170 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CDRT1O95170 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDRT1O95170 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDRT1O95170 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.09□□□□□ -0.31
CDRT1O95170 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CDRT1O95170 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CDRT1O95170 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CDRT1O95170 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDRT1O95170 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms