Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.73□□□□□ -0.21
TRIM3O75382 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.73□□□□□ -0.21
TRIM3O75382 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 REXO1L6P-201ENST00000603433 1515 ntBASIC13.73□□□□□ -0.21
TRIM3O75382 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.72□□□□□ -0.21
TRIM3O75382 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 CNN2P10-201ENST00000443067 918 ntBASIC13.72□□□□□ -0.21
TRIM3O75382 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 OR10B1P-201ENST00000601666 907 ntBASIC13.72□□□□□ -0.21
TRIM3O75382 AC009542.2-202ENST00000619004 1067 ntBASIC13.72□□□□□ -0.21
TRIM3O75382 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRIM3O75382 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRIM3O75382 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRIM3O75382 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRIM3O75382 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM3O75382 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM3O75382 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms