Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 AC020910.5-201ENST00000623668 1865 ntBASIC14.86□□□□□ -0.03
RIPK2O43353 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 MARK2P9-201ENST00000430958 1727 ntBASIC14.86□□□□□ -0.03
RIPK2O43353 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RIPK2O43353 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.86□□□□□ -0.03
RIPK2O43353 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.86□□□□□ -0.03
RIPK2O43353 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RIPK2O43353 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.86□□□□□ -0.03
RIPK2O43353 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
RIPK2O43353 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPK2O43353 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RIPK2O43353 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.85□□□□□ -0.03
RIPK2O43353 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 LINC02486-201ENST00000604157 3000 ntBASIC14.85□□□□□ -0.03
RIPK2O43353 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RIPK2O43353 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RIPK2O43353 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
RIPK2O43353 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RIPK2O43353 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 AC067863.1-201ENST00000494933 530 ntBASIC14.85□□□□□ -0.03
RIPK2O43353 RRP7BP-205ENST00000566851 833 ntBASIC14.85□□□□□ -0.03
RIPK2O43353 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.85□□□□□ -0.03
RIPK2O43353 AP005019.2-201ENST00000615104 511 ntBASIC14.85□□□□□ -0.03
RIPK2O43353 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RIPK2O43353 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.85□□□□□ -0.03
RIPK2O43353 AC134684.3-201ENST00000641758 218 ntBASIC14.85□□□□□ -0.03
RIPK2O43353 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
RIPK2O43353 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RIPK2O43353 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIPK2O43353 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RIPK2O43353 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms