Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
PAX4O43316 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.57□□□□□ -0.72
PAX4O43316 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.57□□□□□ -0.72
PAX4O43316 AC007969.1-201ENST00000433675 447 ntBASIC10.57□□□□□ -0.72
PAX4O43316 AC016694.1-201ENST00000434179 700 ntBASIC10.57□□□□□ -0.72
PAX4O43316 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.57□□□□□ -0.72
PAX4O43316 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AC106760.1-201ENST00000508690 800 ntBASIC10.57□□□□□ -0.72
PAX4O43316 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.57□□□□□ -0.72
PAX4O43316 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.57□□□□□ -0.72
PAX4O43316 AC021321.1-201ENST00000607397 1113 ntBASIC10.57□□□□□ -0.72
PAX4O43316 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC10.57□□□□□ -0.72
PAX4O43316 AC093783.1-201ENST00000612976 329 ntBASIC10.57□□□□□ -0.72
PAX4O43316 IGHV3-72-202ENST00000621503 303 ntBASIC10.57□□□□□ -0.72
PAX4O43316 ENPP7P14-201ENST00000621765 1040 ntBASIC10.57□□□□□ -0.72
PAX4O43316 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 AC018442.1-201ENST00000421439 2061 ntBASIC10.57□□□□□ -0.72
PAX4O43316 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
PAX4O43316 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
PAX4O43316 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PAX4O43316 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.56□□□□□ -0.72
PAX4O43316 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.56□□□□□ -0.72
PAX4O43316 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
PAX4O43316 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.56□□□□□ -0.72
PAX4O43316 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
PAX4O43316 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 CICP14-201ENST00000629111 2732 ntBASIC10.56□□□□□ -0.72
PAX4O43316 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.56□□□□□ -0.72
PAX4O43316 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
PAX4O43316 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
PAX4O43316 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PAX4O43316 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.56□□□□□ -0.72
PAX4O43316 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
PAX4O43316 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC10.56□□□□□ -0.72
PAX4O43316 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.56□□□□□ -0.72
PAX4O43316 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC10.56□□□□□ -0.72
PAX4O43316 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms