Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXN3O00409 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
FOXN3O00409 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 AL157996.1-201ENST00000624684 2299 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 MIR1909-201ENST00000411312 80 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
FOXN3O00409 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.63■□□□□ 0.09
FOXN3O00409 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
FOXN3O00409 AC023310.1-201ENST00000554836 735 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXN3O00409 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 RAB43P1-201ENST00000561790 589 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 DUX4L46-201ENST00000566845 751 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.63■□□□□ 0.09
FOXN3O00409 MIR6775-201ENST00000617557 69 ntBASIC15.63■□□□□ 0.09
FOXN3O00409 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
FOXN3O00409 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXN3O00409 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXN3O00409 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.62■□□□□ 0.09
FOXN3O00409 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC234783.1-201ENST00000441761 496 ntBASIC15.62■□□□□ 0.09
FOXN3O00409 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC079316.1-201ENST00000548397 411 ntBASIC15.62■□□□□ 0.09
FOXN3O00409 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 AL023775.1-201ENST00000454907 1746 ntBASIC15.62■□□□□ 0.09
FOXN3O00409 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXN3O00409 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXN3O00409 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms