Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 UPF3AP2-201ENST00000457924 1132 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC245884.6-201ENST00000515672 1067 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC022217.1-201ENST00000521069 738 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MIR4783-201ENST00000580343 82 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC106872.11-201ENST00000605838 421 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AP001505.2-201ENST00000616815 443 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AL136295.7-201ENST00000619226 1200 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AL122018.1-201ENST00000446607 2310 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AC010141.1-201ENST00000411585 623 ntBASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 RN7SL774P-201ENST00000577467 290 ntBASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AC026740.1-201ENST00000607068 791 ntBASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AC090164.2-201ENST00000611487 516 ntBASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA2E9PIF3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA2E9PIF3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms