Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 AC055811.3-201ENST00000584952 686 ntBASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 AC012073.1-201ENST00000606114 1108 ntBASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HCFC2Q9Y5Z7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 RN7SL564P-201ENST00000496309 250 ntBASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AL118516.1-201ENST00000564152 670 ntBASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AL118522.1-201ENST00000611368 560 ntBASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AGAP7P-201ENST00000582299 2062 ntBASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AGAP14-201ENST00000624701 2060 ntBASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
HCFC2Q9Y5Z7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC067931.2-201ENST00000623655 2003 ntBASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 ACTG1P19-201ENST00000418987 1116 ntBASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC093826.1-201ENST00000508655 993 ntBASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 FAM86B3P-203ENST00000523992 854 ntBASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC012158.2-201ENST00000536546 354 ntBASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HCFC2Q9Y5Z7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms