Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 AC113347.2-201ENST00000512350 279 ntBASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 FBXO36P1-201ENST00000579006 471 ntBASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 AC113385.2-201ENST00000614465 762 ntBASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPBQ9Y5S2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 EEF1DP5-201ENST00000431410 772 ntBASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPBQ9Y5S2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 POR-201ENST00000394893 2532 ntTSL 5 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 TUBB8P4-201ENST00000511806 1324 ntBASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.27■□□□□ 0.99
CDC42BPBQ9Y5S2 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AC025594.1-201ENST00000469533 543 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 Z98885.3-201ENST00000624882 1757 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AC092810.2-201ENST00000431570 362 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AC120498.7-201ENST00000562876 330 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AC079414.2-201ENST00000567157 1104 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 SALL4P6-201ENST00000429385 1691 ntBASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPBQ9Y5S2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 PGK1P2-201ENST00000431702 1214 ntBASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 BRI3P1-201ENST00000440440 378 ntBASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 AC004686.1-201ENST00000605113 538 ntBASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPBQ9Y5S2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 DKKL1P1-201ENST00000400550 698 ntBASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 HNRNPA1P21-201ENST00000424115 961 ntBASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 HNRNPA3P6-201ENST00000472163 1006 ntBASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 TBC1D3P6-201ENST00000505954 962 ntBASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPBQ9Y5S2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms