Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC126335.2-201ENST00000623362 4637 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 RN7SKP175-201ENST00000408472 289 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 RN7SL11P-201ENST00000471305 293 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AC245884.6-201ENST00000515672 1067 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AC079328.1-201ENST00000560358 952 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AL358472.3-201ENST00000608147 415 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 MTHFR-210ENST00000641407 2387 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AC020910.5-201ENST00000623668 1865 ntBASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA1Q9UND3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AL009178.2-201ENST00000597278 2719 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC009093.2-202ENST00000620513 2079 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms