Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 LILRP1-201ENST00000444199 1370 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AC007274.2-201ENST00000421675 662 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 MIR4722-201ENST00000578292 60 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AC132192.2-201ENST00000596206 1147 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AC244394.1-201ENST00000435000 1665 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AP001267.2-201ENST00000532619 2086 ntBASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.55■□□□□ 0.24
HDAC6Q9UBN7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 FAM58BP-201ENST00000439056 645 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 VDAC1P1-201ENST00000439229 848 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 EEF1DP6-201ENST00000449232 372 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 MPRIPP1-201ENST00000452433 1089 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 TMEM198B-204ENST00000484016 896 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 HLA-J-204ENST00000495278 958 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HDAC6Q9UBN7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms