Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 KRT223P-202ENST00000449164 1292 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 SERBP1P3-201ENST00000459980 809 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 GAPDHP40-201ENST00000505218 1006 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 AP005482.1-201ENST00000563722 1273 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 AC072061.1-201ENST00000569710 2234 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCM2LQ9NUG4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 AL133338.1-201ENST00000565695 1517 ntBASIC14□□□□□ -0.17
CCM2LQ9NUG4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14□□□□□ -0.17
CCM2LQ9NUG4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AC004790.1-201ENST00000612686 536 ntBASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 COX11-210ENST00000639671 696 ntBASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCM2LQ9NUG4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 AC011498.7-201ENST00000624986 2027 ntBASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCM2LQ9NUG4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms