Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FOXD2-AS1-201ENST00000445551 2509 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AL355472.2-201ENST00000422958 438 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ATP5G2P3-201ENST00000429083 425 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 TESC-206ENST00000541210 936 ntTSL 3 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AC073912.3-201ENST00000624414 853 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 RGS7BP-201ENST00000334025 4160 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 MON2-214ENST00000641654 10382 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AC022596.2-201ENST00000635352 3078 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 HNRNPRP1-201ENST00000453465 1695 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 HSPA8P5-201ENST00000456928 2069 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 BCL2L13-215ENST00000611738 4817 ntTSL 4 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PTCH1-203ENST00000375274 4720 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CARMN-205ENST00000518014 5131 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 ARHGEF34P-201ENST00000483587 4532 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TBC1D3P5-201ENST00000579401 1545 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms