Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 NPM1P10-201ENST00000398310 865 ntBASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 MIR4313-201ENST00000580760 101 ntBASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AC061975.2-201ENST00000581722 295 ntBASIC17.55■□□□□ 0.4
RTN4Q9NQC3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AL691432.1-201ENST00000596308 1422 ntBASIC17.55■□□□□ 0.4
RTN4Q9NQC3 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 BNIP3P1-202ENST00000550043 1585 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 PPP1R26P1-201ENST00000474415 3613 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AC093909.1-201ENST00000504731 1122 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TRAV11-201ENST00000539512 339 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AL138918.1-201ENST00000568306 659 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AP001005.1-201ENST00000571755 1248 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AC073389.1-201ENST00000595595 795 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 Z83851.2-201ENST00000609564 659 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AL161645.1-201ENST00000622716 1255 ntBASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4Q9NQC3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 FOXO1B-201ENST00000504678 1527 ntBASIC17.53■□□□□ 0.4
RTN4Q9NQC3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 KRT18P2-201ENST00000447938 1258 ntBASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AC018845.2-201ENST00000568326 409 ntBASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN4Q9NQC3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms