Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KLHL4Q9C0H6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 RN7SL618P-201ENST00000477850 296 ntBASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.22□□□□□ -0.13
KLHL4Q9C0H6 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AL080243.2-201ENST00000418783 582 ntBASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 TARDBPP1-201ENST00000442013 1203 ntBASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AC105233.6-201ENST00000642093 218 ntBASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.21□□□□□ -0.13
KLHL4Q9C0H6 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KLHL4Q9C0H6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL4Q9C0H6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms