Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 KRT8P35-201ENST00000483942 1338 ntBASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AC019294.4-201ENST00000561777 2905 ntBASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 PFN1P12-201ENST00000455938 534 ntBASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC023310.1-201ENST00000554836 735 ntBASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC145423.3-201ENST00000615987 467 ntBASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC009542.2-202ENST00000619004 1067 ntBASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC068760.1-201ENST00000493579 1953 ntBASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms