Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 STRCP1-201ENST00000509801 5328 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SPDYE17-201ENST00000412399 783 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AL355306.1-201ENST00000415580 579 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AL671277.1-201ENST00000429656 993 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 RNA5SP415-201ENST00000517246 115 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC106730.1-201ENST00000566722 1090 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC105021.1-202ENST00000570572 669 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AL049840.3-201ENST00000602669 611 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 PCDHB19P-202ENST00000625133 2914 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC066615.1-201ENST00000640911 628 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AF228730.6-201ENST00000641497 218 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC084121.3-201ENST00000641716 218 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC007614.4-201ENST00000564048 1827 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 AC015819.3-201ENST00000624305 2674 ntBASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SEC22CQ9BRL7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AL357140.3-201ENST00000639753 1983 ntBASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AC022400.8-201ENST00000623453 3599 ntBASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.4□□□□□ -0.42
SEC22CQ9BRL7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms