Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCA3Q99758 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ABCA3Q99758 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCA3Q99758 CCND3P1-201ENST00000438347 580 ntBASIC18.62■□□□□ 0.57
ABCA3Q99758 RPL29P2-202ENST00000498671 657 ntBASIC18.62■□□□□ 0.57
ABCA3Q99758 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.62■□□□□ 0.57
ABCA3Q99758 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCA3Q99758 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCA3Q99758 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCA3Q99758 IFNL3P1-201ENST00000595082 501 ntBASIC18.62■□□□□ 0.57
ABCA3Q99758 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCA3Q99758 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA3Q99758 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCA3Q99758 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ABCA3Q99758 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 AC008620.2-201ENST00000510294 1569 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.61■□□□□ 0.57
ABCA3Q99758 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.61■□□□□ 0.57
ABCA3Q99758 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ABCA3Q99758 HDGF-202ENST00000368206 960 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 HMGA1P1-201ENST00000415560 1062 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 KRT18P44-201ENST00000416086 1285 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC18.61■□□□□ 0.57
ABCA3Q99758 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC18.61■□□□□ 0.57
ABCA3Q99758 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 AC084262.1-201ENST00000567818 751 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC18.61■□□□□ 0.57
ABCA3Q99758 RN7SL134P-201ENST00000579756 303 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 RPS5-205ENST00000598495 800 ntTSL 3 BASIC18.61■□□□□ 0.57
ABCA3Q99758 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 NF1P11-201ENST00000621292 1282 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 MEP1AP1-201ENST00000636082 1097 ntBASIC18.61■□□□□ 0.57
ABCA3Q99758 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCA3Q99758 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCA3Q99758 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 HSD3BP1-201ENST00000286193 1111 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 OR7E155P-201ENST00000412208 1014 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.6■□□□□ 0.57
ABCA3Q99758 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC18.6■□□□□ 0.57
ABCA3Q99758 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC18.6■□□□□ 0.57
ABCA3Q99758 ISL1-203ENST00000511384 981 ntTSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 INO80E-209ENST00000567254 625 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 EEF1DP7-201ENST00000580496 513 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 AP001462.1-201ENST00000594089 452 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 AC020922.4-201ENST00000621389 339 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ABCA3Q99758 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ABCA3Q99758 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 MIR1307-201ENST00000408840 149 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ABCA3Q99758 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 YY1P2-201ENST00000438766 948 ntBASIC18.6■□□□□ 0.57
ABCA3Q99758 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.6■□□□□ 0.57
ABCA3Q99758 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ABCA3Q99758 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms