Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC020910.6-201ENST00000623084 1459 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 METTL21AP1-201ENST00000438852 635 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 MEIS3P1-201ENST00000495167 958 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC135586.1-201ENST00000539323 574 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC015911.4-201ENST00000588022 1070 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 AP001160.2-201ENST00000596071 487 ntBASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFT1Q96AA3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.05□□□□□ -0.32
RFT1Q96AA3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TSSK5P-201ENST00000423978 907 ntBASIC13.04□□□□□ -0.32
RFT1Q96AA3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AC092337.1-201ENST00000568699 1129 ntBASIC13.04□□□□□ -0.32
RFT1Q96AA3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFT1Q96AA3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RFT1Q96AA3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms