Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC022447.6-201ENST00000515522 438 ntBASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC006480.2-201ENST00000609770 1337 ntBASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A1Q93050 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 MIR4754-201ENST00000582477 89 ntBASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A1Q93050 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 TBC1D3J-201ENST00000620719 1426 ntBASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 MIR5572-201ENST00000583188 137 ntBASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 AL157813.1-201ENST00000612996 587 ntBASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A1Q93050 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms