Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATL1Q8WXF7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 KLF2P4-201ENST00000451959 1225 ntBASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC073413.1-201ENST00000603927 732 ntBASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC090505.1-201ENST00000430515 1834 ntBASIC14.35□□□□□ -0.11
ATL1Q8WXF7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 PDIA3P1-201ENST00000471856 1510 ntBASIC14.35□□□□□ -0.11
ATL1Q8WXF7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
ATL1Q8WXF7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 ST20-AS1-201ENST00000560255 4223 ntBASIC14.34□□□□□ -0.11
ATL1Q8WXF7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 AP003171.2-201ENST00000528208 925 ntBASIC14.34□□□□□ -0.11
ATL1Q8WXF7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 KRT17P8-201ENST00000540749 863 ntBASIC14.34□□□□□ -0.11
ATL1Q8WXF7 RAB43P1-201ENST00000561790 589 ntBASIC14.34□□□□□ -0.11
ATL1Q8WXF7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATL1Q8WXF7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms