Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 BX539320.1-201ENST00000623759 877 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC015818.8-201ENST00000587907 1519 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RTN4IP1Q8WWV3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC099521.3-201ENST00000624251 2938 ntBASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 DGCR9-201ENST00000609630 2415 ntBASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AL359711.2-201ENST00000563105 872 ntBASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 AC008494.3-201ENST00000606615 944 ntBASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTN4IP1Q8WWV3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 CICP16-201ENST00000502609 2813 ntBASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 RN7SL832P-201ENST00000607781 1756 ntBASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 ELK1P1-201ENST00000485699 580 ntBASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 AC092364.2-202ENST00000597012 1073 ntBASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms