Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM4Q8WVI0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 SPDYE14P-201ENST00000442619 822 ntBASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AC026434.2-201ENST00000506094 1078 ntBASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AC040169.1-201ENST00000565382 521 ntBASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 AL022323.5-201ENST00000624101 2059 ntBASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM4Q8WVI0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AL928654.5-201ENST00000624831 2501 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 FAM58DP-201ENST00000428076 619 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RPL13AP23-201ENST00000480739 586 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AL512361.1-201ENST00000554200 418 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RN7SL510P-201ENST00000581311 263 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SLC25A6P4-201ENST00000586535 553 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 PRSS30P-206ENST00000641773 873 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AC064801.2-201ENST00000625052 1303 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 DRD5P1-201ENST00000456605 1438 ntBASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms