Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 SORD2P-201ENST00000558556 1069 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 AL358472.5-202ENST00000641448 1267 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 ST20-AS1-201ENST00000560255 4223 ntBASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LSMEM1Q8N8F7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.46□□□□□ -0.26
LSMEM1Q8N8F7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AL118506.1-201ENST00000601296 3082 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC004945.1-201ENST00000416738 983 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 CNN2P8-201ENST00000421872 913 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 FAM8A4P-201ENST00000435433 1213 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC008825.2-201ENST00000603374 718 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 ECM1P1-201ENST00000604092 1279 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TRIM80P-201ENST00000455685 2848 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC083964.2-201ENST00000623988 2396 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 CU639417.3-201ENST00000624240 1404 ntBASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.45□□□□□ -0.26
LSMEM1Q8N8F7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms