Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 FTH1P14-201ENST00000482930 551 ntBASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 AC025048.6-201ENST00000634326 1161 ntBASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
CCDC83Q8IWF9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC098614.1-201ENST00000368528 745 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC005229.1-201ENST00000392885 409 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 FAM8A4P-201ENST00000435433 1213 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 HMGN1P19-201ENST00000436976 333 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC007389.4-201ENST00000454674 793 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC011495.1-201ENST00000498085 584 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 RNA5SP486-201ENST00000515961 83 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC008735.3-201ENST00000596646 500 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 AC002472.3-201ENST00000640124 621 ntBASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC83Q8IWF9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 AC007326.2-201ENST00000624224 7579 ntBASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 AC023794.5-201ENST00000564380 2157 ntBASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC83Q8IWF9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms