Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC098614.1-201ENST00000368528 745 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC007389.4-201ENST00000454674 793 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC011495.1-201ENST00000498085 584 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC103988.2-201ENST00000561804 725 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC025279.2-201ENST00000569730 653 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AC025048.6-201ENST00000634326 1161 ntBASIC13□□□□□ -0.33
LINC00346Q8IVM7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC00346Q8IVM7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00346Q8IVM7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC020910.6-201ENST00000623084 1459 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 RN7SKP175-201ENST00000408472 289 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 TMEM14DP-201ENST00000422205 345 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 INE1-201ENST00000456273 945 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 RN7SL692P-201ENST00000464677 288 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC106820.3-201ENST00000561653 397 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AC027307.3-201ENST00000594262 1100 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 OR10B1P-201ENST00000601666 907 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 AP001002.3-201ENST00000623482 206 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 HSPA8P5-201ENST00000456928 2069 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 KHSRPP1-201ENST00000427983 1768 ntBASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms