Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 AC005014.1-201ENST00000432006 2976 ntBASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 FAAHP1-202ENST00000446499 1238 ntBASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 HLA-A-201ENST00000376802 1334 ntBASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AL645937.6-201ENST00000641122 3727 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TNRC18P1-201ENST00000502875 3650 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AC004870.1-201ENST00000315132 882 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 KRT18P64-201ENST00000434946 1219 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AC003958.1-201ENST00000435883 421 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 AC106730.1-201ENST00000566722 1090 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 UXT-AS1-201ENST00000590504 1525 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 TUBB8P4-201ENST00000511806 1324 ntBASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LYSMD2Q8IV50 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LYSMD2Q8IV50 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms