Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AL161773.1-201ENST00000624845 863 ntBASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 REXO1L4P-201ENST00000605109 1937 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 FKBP4P6-201ENST00000457486 1332 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AL512430.1-201ENST00000392575 860 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AL592076.1-201ENST00000424448 303 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AC018463.1-201ENST00000456674 917 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 ALG1L13P-202ENST00000519320 584 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AC008805.1-201ENST00000590892 364 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AC004466.1-201ENST00000599515 1080 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 MIR6858-201ENST00000620733 67 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 Z99916.3-201ENST00000623422 1080 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AGAP7P-201ENST00000582299 2062 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AGAP14-201ENST00000624701 2060 ntBASIC15.55■□□□□ 0.08
RNF135Q8IUD6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF135Q8IUD6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 AC055811.4-201ENST00000624039 1754 ntBASIC15.54■□□□□ 0.08
RNF135Q8IUD6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF135Q8IUD6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms