Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC140479.7-201ENST00000636301 2332 ntBASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC078875.1-201ENST00000431907 724 ntBASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 CALR4P-201ENST00000431943 946 ntBASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 NDUFV2P1-201ENST00000596415 907 ntBASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC026740.1-201ENST00000607068 791 ntBASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM4Q86VH4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM4Q86VH4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC022494.1-201ENST00000466044 728 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC125604.1-201ENST00000496255 707 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC005586.2-201ENST00000563946 837 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AL645939.5-201ENST00000606834 243 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC100757.4-201ENST00000626934 759 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AL805961.1-203ENST00000641078 1258 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AC015656.1-201ENST00000624209 3578 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 SNX18-202ENST00000343017 3140 ntBASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM4Q86VH4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms