Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 BX640514.1-201ENST00000583223 1918 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AL354877.1-201ENST00000424412 413 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AL035414.1-201ENST00000451327 857 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PFN1P12-201ENST00000455938 534 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 AC015802.1-201ENST00000588104 1449 ntBASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD3Q7Z3D4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC215219.1-201ENST00000400706 1817 ntBASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC005730.2-201ENST00000564549 1184 ntBASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD3Q7Z3D4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms