Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AC022447.6-201ENST00000515522 438 ntBASIC14.05□□□□□ -0.16
RNF44Q7L0R7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AGGF1P1-201ENST00000509500 2073 ntBASIC14.05□□□□□ -0.16
RNF44Q7L0R7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 AC126335.2-201ENST00000623362 4637 ntBASIC14.05□□□□□ -0.16
RNF44Q7L0R7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF44Q7L0R7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AC131212.3-201ENST00000624087 4219 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RNMTL1P1-201ENST00000454103 560 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 TPT1P11-201ENST00000458482 498 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 SERPINA13P-202ENST00000478994 924 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AC009884.2-201ENST00000603110 324 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 AP000346.4-201ENST00000614827 381 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.04□□□□□ -0.16
RNF44Q7L0R7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF44Q7L0R7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.03□□□□□ -0.16
RNF44Q7L0R7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF44Q7L0R7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms