Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AC114947.1-202ENST00000514136 344 ntBASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AP003398.1-201ENST00000531124 318 ntBASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SIGLEC18P-201ENST00000602271 909 ntBASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 MIR6858-201ENST00000620733 67 ntBASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC149Q6ZUS6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 KHSRPP1-201ENST00000427983 1768 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 ST13P19-201ENST00000442505 1124 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 PIN4P1-201ENST00000451079 396 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 KRT18P66-201ENST00000452970 1269 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 NDUFS6P1-201ENST00000485187 316 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 RN7SL81P-201ENST00000493781 261 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 KRT8P31-201ENST00000504812 1408 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 AC015688.4-201ENST00000580780 1647 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 AL591471.1-201ENST00000621855 229 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 SBF1P1-201ENST00000444527 5631 ntBASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC149Q6ZUS6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC149Q6ZUS6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms