Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRWD3Q6RI45 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
BRWD3Q6RI45 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRWD3Q6RI45 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.08■□□□□ 0.48
BRWD3Q6RI45 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 RBMXP1-201ENST00000408004 1191 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 RN7SL794P-201ENST00000469816 280 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 JPT1-205ENST00000470924 663 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AL139317.2-201ENST00000556998 158 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AC022382.1-201ENST00000602768 336 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AC127002.1-201ENST00000619123 455 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 HNRNPA1P72-201ENST00000529511 967 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AC091691.1-201ENST00000583587 1018 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.07■□□□□ 0.48
BRWD3Q6RI45 AC011477.7-201ENST00000617163 1440 ntBASIC18.07■□□□□ 0.48
BRWD3Q6RI45 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 AC068760.1-201ENST00000493579 1953 ntBASIC18.06■□□□□ 0.48
BRWD3Q6RI45 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 Z84721.1-201ENST00000438841 372 ntBASIC18.06■□□□□ 0.48
BRWD3Q6RI45 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 FAM223B-202ENST00000598177 713 ntBASIC18.06■□□□□ 0.48
BRWD3Q6RI45 AL137028.2-201ENST00000614601 256 ntBASIC18.06■□□□□ 0.48
BRWD3Q6RI45 FAM223A-202ENST00000625204 713 ntBASIC18.06■□□□□ 0.48
BRWD3Q6RI45 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRWD3Q6RI45 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SNORD88B-201ENST00000408454 91 ntBASIC18.05■□□□□ 0.48
BRWD3Q6RI45 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 AC005011.1-201ENST00000455206 210 ntBASIC18.05■□□□□ 0.48
BRWD3Q6RI45 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 AL136298.3-201ENST00000556746 445 ntBASIC18.05■□□□□ 0.48
BRWD3Q6RI45 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRWD3Q6RI45 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms