Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CLK3P2-201ENST00000427566 1453 ntBASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 AL358933.1-201ENST00000565046 2830 ntBASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 PIN1P1-201ENST00000412108 996 ntBASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 AL391069.4-201ENST00000609583 481 ntBASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM53Q6P2H8 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC126365.1-201ENST00000578585 1514 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AL049840.4-201ENST00000602422 811 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC004790.1-201ENST00000612686 536 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AL645728.2-202ENST00000641679 227 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms