Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 CDKN2A-AS1-201ENST00000441769 823 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 RN7SL351P-201ENST00000469306 248 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 RN7SL838P-201ENST00000481676 295 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 RN7SL767P-201ENST00000493013 295 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 CCNL2P1-201ENST00000512846 969 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AC100858.1-201ENST00000514059 1228 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 BAK1P2-201ENST00000532665 631 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SNORD3B-1-201ENST00000577988 758 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 OR3A1-202ENST00000615105 966 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AC091769.1-201ENST00000619576 568 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AC048382.6-201ENST00000621980 1223 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AD000864.1-201ENST00000624076 2295 ntBASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST2H2BCQ6DN03 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ODCP-201ENST00000459650 1639 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC011270.2-201ENST00000624293 2550 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC019109.1-201ENST00000401725 1874 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC022080.1-201ENST00000366255 781 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 FAM21EP-201ENST00000417804 985 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ST13P19-201ENST00000442505 1124 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC022121.1-201ENST00000484584 579 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ABCC6P2-201ENST00000526069 590 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 TPST2P1-201ENST00000564073 1102 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 RN7SL605P-201ENST00000577229 281 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 EMP3-204ENST00000596315 761 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 AC126755.5-201ENST00000622756 267 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST2H2BCQ6DN03 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms