Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 GEMIN8P4-201ENST00000380526 729 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PEBP1P3-201ENST00000455475 548 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 RPS18P9-201ENST00000482817 460 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC026412.1-206ENST00000502273 206 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC113347.2-201ENST00000512350 279 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AP000920.1-201ENST00000531824 344 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 VENTXP3-201ENST00000546480 773 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC006116.2-201ENST00000589958 988 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 REXO1L2P-201ENST00000425429 2069 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 SIGLEC20P-201ENST00000595243 1311 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 RNVU1-8-201ENST00000364272 125 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 AL157823.1-201ENST00000403727 628 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 MED15P3-201ENST00000413613 326 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 RN7SL564P-201ENST00000496309 250 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 MIR2278-201ENST00000516344 96 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 AC091304.3-201ENST00000566500 716 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 AL357143.1-203ENST00000639750 881 ntBASIC14□□□□□ -0.17
RSPO4Q2I0M5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
RSPO4Q2I0M5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO4Q2I0M5 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 SALL4P5-201ENST00000419001 1760 ntBASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms