Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 LINC00115-201ENST00000473798 1317 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 PDXDC2P-206ENST00000534700 1315 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 AC106827.1-201ENST00000366454 431 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 AC092573.1-201ENST00000433054 884 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.81■□□□□ 0.44
DDR1Q08345 STK24P1-201ENST00000455035 1291 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 AC025186.1-201ENST00000478174 870 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 AC023968.2-201ENST00000560593 1049 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 MIR4265-201ENST00000582152 99 ntBASIC17.81■□□□□ 0.44
DDR1Q08345 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.81■□□□□ 0.44
DDR1Q08345 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDR1Q08345 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.81■□□□□ 0.44
DDR1Q08345 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDR1Q08345 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDR1Q08345 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DDR1Q08345 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.8■□□□□ 0.44
DDR1Q08345 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDR1Q08345 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.8■□□□□ 0.44
DDR1Q08345 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.8■□□□□ 0.44
DDR1Q08345 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.8■□□□□ 0.44
DDR1Q08345 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 RN7SL288P-201ENST00000490496 291 ntBASIC17.8■□□□□ 0.44
DDR1Q08345 PRSS3P1-201ENST00000503996 742 ntBASIC17.8■□□□□ 0.44
DDR1Q08345 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.8■□□□□ 0.44
DDR1Q08345 RN7SKP155-201ENST00000516031 288 ntBASIC17.8■□□□□ 0.44
DDR1Q08345 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
DDR1Q08345 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.8■□□□□ 0.44
DDR1Q08345 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.8■□□□□ 0.44
DDR1Q08345 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.8■□□□□ 0.44
DDR1Q08345 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.8■□□□□ 0.44
DDR1Q08345 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDR1Q08345 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDR1Q08345 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 AL365181.1-201ENST00000564032 1828 ntBASIC17.79■□□□□ 0.44
DDR1Q08345 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 GEMIN8P4-201ENST00000380526 729 ntBASIC17.79■□□□□ 0.44
DDR1Q08345 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.79■□□□□ 0.44
DDR1Q08345 AL451000.1-201ENST00000451300 1186 ntBASIC17.79■□□□□ 0.44
DDR1Q08345 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.79■□□□□ 0.44
DDR1Q08345 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
DDR1Q08345 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.79■□□□□ 0.44
DDR1Q08345 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms