Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 PDIA3P1-201ENST00000471856 1510 ntBASIC14.14□□□□□ -0.15
PCDH1Q08174 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDH1Q08174 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDH1Q08174 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDH1Q08174 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDH1Q08174 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDH1Q08174 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDH1Q08174 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
PCDH1Q08174 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 SHC1P1-201ENST00000425230 1745 ntBASIC14.13□□□□□ -0.15
PCDH1Q08174 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PCDH1Q08174 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
PCDH1Q08174 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
PCDH1Q08174 MIR1202-201ENST00000408529 83 ntBASIC14.13□□□□□ -0.15
PCDH1Q08174 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.13□□□□□ -0.15
PCDH1Q08174 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDH1Q08174 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PCDH1Q08174 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PCDH1Q08174 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDH1Q08174 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PCDH1Q08174 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDH1Q08174 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PCDH1Q08174 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDH1Q08174 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDH1Q08174 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDH1Q08174 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDH1Q08174 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDH1Q08174 AC005586.2-201ENST00000563946 837 ntBASIC14.12□□□□□ -0.15
PCDH1Q08174 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDH1Q08174 PPY2P-201ENST00000582808 702 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms